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Software

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Software Accessible on Schooner

Free and/or open-sourced software is accessible to all OSCER users. Software licensed through the University of Oklahoma is only acessible to eligible University of Oklahoma faculty, staff and students. Software purchased by individuals will only be made available to them and designees of their choosing.

Click here to see the list of installed software and libraries.

Requesting a new software installation

You may request new software deployments at any time, but we highly recommend sending your request as quickly as possible. For non-commercial users, OSCER can deploy software for you free of charge.

Requests must be sent to support@oscer.ou.edu with the following information:

  • Name of the software
  • The version of the software
  • URL to download the installer package, OR, copy of the installer package
    NOTE: Software must Linux compatible and capable of running in a multi-cluster environment
  • Any other information pertinent to successfully deploying the software (compiler information, etc.)

Every effort will be made to process requests as quickly as possible. Since each software deployment is different and poses its own challenges and complexities, we are unable to provide an estimate or guarantee a turnaround time. We strongly recomend sending us your request as soon as you anticipate a possible need (rather than waiting until you actually need to use it).

You may also deploy software in your home directory, but only to the limit of your quota (20 GB in most cases). We don't recommend deploying software in your scratch directory because it'll get automatically deleted after a few weeks.

Note about Commercial Software:
Users wanting to have commercial software deployed on OSCER systems are responsible for the costs associated with licensing. OSCER does not fund commercial software. Prior to purchasing the software, please work with us to verify that the software that you want to buy is compatible with our systems and is allowed by the vendor to be deployed there.

Software List

To get the most up-to-date list, log into the Schooner system and run module avail.

Note about software availability:
Some of the software listed below have licensing restrictions and can only be used by eligible users. Please contact us at support@oscer.ou.edu if you have questions about whether you can use a particular software.

454DataAnalysis

Version Toolchain / Variant
2.9  
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ABySS

Version Toolchain / Variant
1.5.2 goolf-1.4.10
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AMOS

Version Toolchain / Variant
3.1.0 goolf-1.4.10
Back to the list

ANSYS_Workbench

Version Toolchain / Variant
17.2  
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ANTLR

Version Toolchain / Variant
2.7.7 intel-2015b-Python-2.7.10
2.7.7 intel-2018a (Current Default Version)
Back to the list

ATK

Version Toolchain / Variant
2.20.0 GCC-4.9.3-2.25
2.20.0 intel-2016a (Current Default Version)
Back to the list

ATLAS

Version Toolchain / Variant
3.10.1 GCC-4.9.3-2.25-LAPACK-3.5.0
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ATSAS

Version Toolchain / Variant
2.8.4 intel-2016a
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Amber

Version Toolchain / Variant
16 gcc-4.9.3-2.25-cuda
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AutoDock

Version Toolchain / Variant
4.2.6 intel-2016a
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AutoDockFR

Version Toolchain / Variant
mgltools2_1.0 GCC-4.9.3-2.25
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AutoDockVina

Version Toolchain / Variant
1.1.2  
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Autoconf

Version Toolchain / Variant
2.69 foss-2016a
2.69 foss-2016b
2.69 GCC-4.9.2
2.69 GCC-4.9.3-2.25
2.69 GCCcore-4.9.3
2.69 GCCcore-6.4.0
2.69 GNU-4.9.3-2.25
2.69 goolf-1.4.10
2.69 intel-2016a (Current Default Version)
Back to the list

Automake

Version Toolchain / Variant
1.14 intel-2016a
1.15 foss-2016a
1.15 foss-2016b
1.15 GCC-4.9.2
1.15 GCC-4.9.3-2.25
1.15 GCCcore-4.9.3
1.15 GNU-4.9.3-2.25
1.15 intel-2016a (Current Default Version)
1.15.1 GCCcore-6.4.0
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Autotools

Version Toolchain / Variant
20150215 foss-2016a
20150215 foss-2016b
20150215 GCC-4.9.2
20150215 GCC-4.9.3-2.25
20150215 GCCcore-4.9.3
20150215 GNU-4.9.3-2.25
20150215 intel-2016a (Current Default Version)
20170619 GCCcore-6.4.0
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BEDTools

Version Toolchain / Variant
2.25.0 intel-2016a
2.26.0 intel-2016a (Current Default Version)
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BLAST

Version Toolchain / Variant
2.2.22 Linux_x86_64
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BLAST+

Version Toolchain / Variant
2.2.30 foss-2016b
2.2.30 goolf-1.4.10 (Current Default Version)
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BLAT

Version Toolchain / Variant
3.5 goolf-1.4.10
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BWA

Version Toolchain / Variant
0.7.13 intel-2016a
0.7.15 intel-2016a (Current Default Version)
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Bazel

Version Toolchain / Variant
0.4.0 2016-11-04
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Bio-Coordinate

Version Toolchain / Variant
1.007001 foss-2016b-BioPerl-1.7.0
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Bio-Graphics

Version Toolchain / Variant
2.40 foss-2016b-BioPerl-1.7.0
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BioPerl

Version Toolchain / Variant
1.6.1 goolf-1.4.10-Perl-5.16.3
1.7.0 foss-2016b-Perl-5.24.0 (Current Default Version)
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Biopython

Version Toolchain / Variant
1.61 goolf-1.4.10-Python-2.7.3
1.68 intel-2016a-Python-2.7.10 (Current Default Version)
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Bismark

Version Toolchain / Variant
0.10.1 goolf-1.4.10
0.16.3 intel-2016a (Current Default Version)
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Bison

Version Toolchain / Variant
2.7 goolf-1.4.10
3.0.4 foss-2016b
3.0.4 foss-2017b
3.0.4 GCC-4.9.3-binutils-2.25
3.0.4 GCC-4.9.3-2.25
3.0.4 GCCcore-4.9.3
3.0.4 GCCcore-5.4.0
3.0.4 GCCcore-6.4.0
3.0.4 GCCcore-7.2.0
3.0.4 intel-2015b
3.0.4 intel-2016a
3.0.4 iompi-2015.03
3.0.4 (Current Default Version)
Back to the list

Boost

Version Toolchain / Variant
1.51.0 goolf-1.4.10
1.53.0 goolf-1.4.10
1.57.0 foss-2016b
1.57.0 goolf-1.4.10
1.59.0 intel-2016a-Python-2.7.10
1.60.0 foss-2016a
1.61.0 foss-2016b-Python-2.7.12
1.61.0 foss-2016b
1.61.0 GCC-4.9.3-2.25
1.61.0 intel-2016a-Python-2.7.11
1.61.0 intel-2016a
1.65.1 foss-2016b (Current Default Version)
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Bowtie

Version Toolchain / Variant
1.1.2 foss-2016a
Back to the list

Bowtie2

Version Toolchain / Variant
2.0.2 goolf-1.4.10
2.2.4 goolf-1.4.10
2.2.9 foss-2016a
2.2.9 intel-2016a (Current Default Version)
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CD-HIT

Version Toolchain / Variant
4.6.1 goolf-1.4.10-2012-08-27
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CDO

Version Toolchain / Variant
1.7.1 intel-2016a
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CGAL

Version Toolchain / Variant
4.8.1 intel-2016a
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CGI

Version Toolchain / Variant
4.35 foss-2016b-Perl-5.24.0
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CMake

Version Toolchain / Variant
2.8.12 goolf-1.4.10
3.3.2 GNU-4.9.3-2.25
3.4.1 foss-2016a
3.4.1 intel-2015b
3.4.1 intel-2016a
3.4.3 GCC-4.9.3-2.25
3.4.3 intel-2016a
3.4.3 iompi-2015.03
3.5.1 intel-2016a
3.5.2 foss-2016a
3.5.2 foss-2016b
3.5.2 GCC-4.9.3-2.25
3.5.2 intel-2016a
3.5.2  
3.6.1 foss-2016b
3.6.1 GCCcore-4.9.3
3.6.1 intel-2016a
3.9.4 GCCcore-6.4.0
3.9.5 GCCcore-6.4.0 (Current Default Version)
Back to the list

CUDA

Version Toolchain / Variant
5.5.22 GCC-4.8.2
7.5.18 GCC-4.9.3-2.25
7.5.18  
8.0.44 GCC-4.9.3-2.25
8.0.44 intel-2016a
8.0.61_375.26 GCC-5.4.0-2.26 (Current Default Version)
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Caffe

Version Toolchain / Variant
1.0.0 rc5-GCC-4.9.3-2.25
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CellRanger

Version Toolchain / Variant
2.1.1  
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Chimera

Version Toolchain / Variant
1.11.2 linux_x86_64
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Chiron

Version Toolchain / Variant
0.3 intel-2016a-GPU-Python-2.7.12
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ClustalW2

Version Toolchain / Variant
2.1 goolf-1.4.10
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CoreNLP

Version Toolchain / Variant
3.9.1 Java-1.8.0_152
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CppUnit

Version Toolchain / Variant
1.12.1 foss-2016b
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Cufflinks

Version Toolchain / Variant
2.2.1 intel-2016a-Python-2.7.10-Boost-1.59.0
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DIAMOND

Version Toolchain / Variant
0.8.5 intel-2016a
0.8.33 foss-2016b (Current Default Version)
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Doxygen

Version Toolchain / Variant
1.8.3.1 goolf-1.4.10
1.8.10 intel-2015b
1.8.10 intel-2016a
1.8.11 foss-2016b
1.8.11 intel-2016a
1.8.11 iompi-2015.03 (Current Default Version)
1.8.13 GCCcore-6.4.0
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Eigen

Version Toolchain / Variant
3.2.7 intel-2016a
3.2.9 intel-2016a (Current Default Version)
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FASTA

Version Toolchain / Variant
36.3.5e goolf-1.4.10
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FASTX-Toolkit

Version Toolchain / Variant
0.0.13.2 goolf-1.4.10
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FFTW

Version Toolchain / Variant
3.3.3 gompi-1.4.10
3.3.4 gompi-2016a
3.3.4 gompi-2016b
3.3.4 intel-2016a
3.3.6 gompi-2017b (Current Default Version)
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FFmpeg

Version Toolchain / Variant
3.0.2 GCC-4.9.3-2.25
3.0.2 intel-2016a (Current Default Version)
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FIAT

Version Toolchain / Variant
1.6.0 foss-2016b-Python-2.7.12
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FLTK

Version Toolchain / Variant
1.3.3 intel-2016a
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FLUENT

Version Toolchain / Variant
16.2  
17.2 (Current Default Version)
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FastQC

Version Toolchain / Variant
0.10.1 Java-1.7.0_80
0.11.5 Java-1.8.0_91 (Current Default Version)
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FragGeneScan

Version Toolchain / Variant
1.30 foss-2016b
1.30 intel-2016a (Current Default Version)
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FragGeneScan-Plus

Version Toolchain / Variant
git master-foss-2016b
git master-intel-2016a (Current Default Version)
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GAMESS-US

Version Toolchain / Variant
20180214 R1-intel-2016a
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GATK

Version Toolchain / Variant
3.6 Java-1.8.0_91
3.8 0-Java-1.8.0_141 (Current Default Version)
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GCC

Version Toolchain / Variant
4.6.3  
4.7.2  
4.8.1  
4.8.2  
4.9.2  
4.9.3 binutils-2.25
4.9.3 2.25
5.4.0 2.26
6.4.0 2.28
7.2.0 2.29 (Current Default Version)
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GCCcore

Version Toolchain / Variant
4.9.3  
5.4.0  
6.4.0  
7.2.0 (Current Default Version)
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GD

Version Toolchain / Variant
2.53 foss-2016b-Perl-5.24.0
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GDAL

Version Toolchain / Variant
2.0.0 intel-2016a
2.0.2 intel-2016a
2.1.0 foss-2016b
2.1.0 intel-2016a (Current Default Version)
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GEOS

Version Toolchain / Variant
3.5.0 intel-2016a-Python-2.7.11
3.5.0 intel-2016a-Python-2.7.12 (Current Default Version)
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GLib

Version Toolchain / Variant
2.44.1 intel-2016a
2.48.0 GCC-4.9.3-2.25
2.48.0 intel-2016a
2.49.5 foss-2016b
2.49.5 intel-2016a (Current Default Version)
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GMP

Version Toolchain / Variant
6.0.0a GCC-4.9.2
6.0.0a GCC-4.9.3-2.25
6.1.0 foss-2016a
6.1.0 intel-2016a
6.1.1 foss-2016b
6.1.1 intel-2016a
6.1.2 intel-2016a (Current Default Version)
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GMT

Version Toolchain / Variant
4.5.14 intel-2016a
5.2.1 intel-2016a (Current Default Version)
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GNU

Version Toolchain / Variant
4.9.3 2.25
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GObject-Introspection

Version Toolchain / Variant
1.48.0 GCC-4.9.3-2.25
1.48.0 intel-2016a (Current Default Version)
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GROMACS

Version Toolchain / Variant
4.6.5 goolf-1.4.10-hybrid
5.1.2 foss-2016a-hybrid
5.1.2 foss-2016b-hybrid-gpu
2018.1 foss-2016b-hybrid-gpu (Current Default Version)
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GSL

Version Toolchain / Variant
1.16 goolf-1.4.10
1.16 intel-2015b
1.16 intel-2016a
2.1 intel-2016a
2.3 foss-2016b
2.4 GCCcore-6.4.0 (Current Default Version)
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GTK+

Version Toolchain / Variant
2.24.30 GCC-4.9.3-2.25
2.24.30 intel-2016a (Current Default Version)
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Gaussian

Version Toolchain / Variant
g09  
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Gaussview

Version Toolchain / Variant
g09  
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Gdk-Pixbuf

Version Toolchain / Variant
2.35.1 GCC-4.9.3-2.25
2.35.1 intel-2016a (Current Default Version)
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Ghostscript

Version Toolchain / Variant
9.16 intel-2016a
9.19 intel-2016a (Current Default Version)
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GrADS

Version Toolchain / Variant
2.1.1.b0 bin
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HDF

Version Toolchain / Variant
4.2.13 iomkl-2018a-no-netcdf
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HDF5

Version Toolchain / Variant
1.8.10 patch1-goolf-1.4.10
1.8.13 intel-2015b
1.8.13 intel-2016a
1.8.15 patch1-intel-2015b
1.8.16 GCC-4.9.3-2.25
1.8.16 intel-2016a
1.8.16 iompi-2015.03
1.8.17 foss-2016b
1.8.17 intel-2016a
1.8.18 intel-2016a
1.8.19 intel-2018a
1.10.1 foss-2017b-serial
1.10.1 foss-2017b
1.10.1 intel-2016a-serial
1.10.1 intel-2016a
1.10.1 iomkl-2018a
1.10.1 iompi-2016.07 (Current Default Version)
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HMMER

Version Toolchain / Variant
3.1b1 foss-2016b
3.1b1 goolf-1.4.10 (Current Default Version)
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HPL

Version Toolchain / Variant
2.1 intel-2016a
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HTSeq

Version Toolchain / Variant
0.6.1p1 intel-2016a-Python-2.7.10
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Hadoop

Version Toolchain / Variant
2.6.0 cdh5.8.0-native
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HarfBuzz

Version Toolchain / Variant
1.2.7 GCC-4.9.3-2.25
1.2.7 intel-2016a (Current Default Version)
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Hypre

Version Toolchain / Variant
2.11.1 foss-2016b
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IDBA-UD

Version Toolchain / Variant
1.1.1 goolf-1.4.10
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ImageMagick

Version Toolchain / Variant
7.0.4 0-intel-2016a
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JUnit

Version Toolchain / Variant
4.12 Java-1.8.0_91
4.12 Java-1.8.0_92 (Current Default Version)
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JasPer

Version Toolchain / Variant
1.900.1 GCC-4.9.3-2.25
1.900.1 intel-2016a
1.900.1 iompi-2015.03 (Current Default Version)
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Java

Version Toolchain / Variant
1.7.0_21  
1.7.0_60  
1.7.0_80  
1.8.0_45  
1.8.0_66  
1.8.0_77  
1.8.0_91  
1.8.0_92  
1.8.0_121  
1.8.0_141  
1.8.0_152  
1.8.0_181 (Current Default Version)
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Keras

Version Toolchain / Variant
2.0.4 intel-2016a-Python-2.7.12
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LAMMPS

Version Toolchain / Variant
11Aug17 gompi-2017b
14May16 gompi-2016a
16Mar18 gompi-2017b
17Nov16 gompi-2016a (Current Default Version)
17Nov16gong gompi-2016a
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LLVM

Version Toolchain / Variant
3.8.0 intel-2016a
3.8.1 foss-2016b
3.8.1 intel-2016a (Current Default Version)
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LMDB

Version Toolchain / Variant
0.9.18 GCC-4.9.3-2.25
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LevelDB

Version Toolchain / Variant
1.18 GCC-4.9.3-2.25
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LibTIFF

Version Toolchain / Variant
4.0.4 intel-2016a
4.0.6 foss-2016b
4.0.6 GCC-4.9.3-2.25
4.0.6 intel-2016a (Current Default Version)
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LibUUID

Version Toolchain / Variant
1.0.3 GCCcore-6.4.0
1.0.3 intel-2015b (Current Default Version)
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LittleCMS

Version Toolchain / Variant
2.7 intel-2016a
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Loci

Version Toolchain / Variant
4.0 beta-8-intel-2016a
4.0 beta-10-intel-2016a (Current Default Version)
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M4

Version Toolchain / Variant
1.4.16 goolf-1.4.10
1.4.17 foss-2016a
1.4.17 foss-2016b
1.4.17 GCC-4.9.2
1.4.17 GCC-4.9.3-binutils-2.25
1.4.17 GCC-4.9.3-2.25
1.4.17 GCCcore-4.9.3
1.4.17 GCCcore-5.4.0
1.4.17 GNU-4.9.3-2.25
1.4.17 intel-2015b
1.4.17 intel-2016a
1.4.17 iompi-2015.03
1.4.17  
1.4.18 foss-2017b
1.4.18 GCCcore-5.4.0
1.4.18 GCCcore-6.4.0
1.4.18 GCCcore-7.2.0
1.4.18 (Current Default Version)
Back to the list

MAFFT

Version Toolchain / Variant
7.130 goolf-1.4.10-with-extensions
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MATLAB

Version Toolchain / Variant
2015a (Current Default Version)
2017a  
2018a Prerelease
2018a  
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MEGAHIT

Version Toolchain / Variant
1.0.6 intel-2016a
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MEGAN

Version Toolchain / Variant
5.11.3  
6.6.0 (Current Default Version)
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METIS

Version Toolchain / Variant
5.1.0 foss-2016b
5.1.0 intel-2016a (Current Default Version)
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MPFR

Version Toolchain / Variant
3.1.4 intel-2016a
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MS2

Version Toolchain / Variant
2.0 intel-2016a
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MUMPS

Version Toolchain / Variant
5.0.1 foss-2016b-parmetis
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MUMmer

Version Toolchain / Variant
3.23 goolf-1.4.10
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MUSCLE

Version Toolchain / Variant
3.8.1551 intel-2016a
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MVAPICH2

Version Toolchain / Variant
2.2rc2 iccifort-2016.1.150-GCC-4.9.3-2.25
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Madagascar

Version Toolchain / Variant
1.7 foss-2016b
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Mako

Version Toolchain / Variant
1.0.4 foss-2016b-Python-2.7.12
1.0.4 intel-2016a-Python-2.7.12 (Current Default Version)
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Maq

Version Toolchain / Variant
0.7.0  
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Mathematica

Version Toolchain / Variant
9.0.1  
11.0.1 (Current Default Version)
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Maven

Version Toolchain / Variant
3.3.9  
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MeGAMerge

Version Toolchain / Variant
1.1  
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Mesa

Version Toolchain / Variant
11.1.2 GCC-4.9.3-2.25
11.2.1 intel-2016a
12.0.2 foss-2016b
12.0.2 intel-2016a (Current Default Version)
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MetaVelvet

Version Toolchain / Variant
1.2.01 goolf-1.4.10
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Mothur

Version Toolchain / Variant
1.30.2 goolf-1.4.10
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NAMD

Version Toolchain / Variant
2.10 intel-2016a-mpi
2.11 intel-2016a-mpi
2.11 intel-2016aMIC (Current Default Version)
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NASM

Version Toolchain / Variant
2.11.05 intel-2016a
2.11.08 intel-2016a
2.12.01 GCC-4.9.3-2.25
2.12.01 intel-2016a
2.12.02 foss-2016b
2.12.02 intel-2016a (Current Default Version)
2.13.02 GCCcore-6.4.0
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NCL

Version Toolchain / Variant
6.3.0 OPeNDAP-GCC-4.8.2
6.3.0 (Current Default Version)
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NCO

Version Toolchain / Variant
4.4.7 intel-2015b-Python-2.7.10
4.7.6 intel-2018a (Current Default Version)
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NGS

Version Toolchain / Variant
1.2.3 intel-2016a
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NTL

Version Toolchain / Variant
10.5.0 intel-2016a
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NVIDIA_GPU_SDK

Version Toolchain / Variant
4.0.17 GCC-4.9.3-2.25
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OpenBLAS

Version Toolchain / Variant
0.2.6 gompi-1.4.10-LAPACK-3.4.2
0.2.9 intel-2016a-LAPACK-3.5.0
0.2.15 GCC-4.9.3-2.25-LAPACK-3.6.0
0.2.18 GCC-5.4.0-2.26-LAPACK-3.6.1
0.2.19 foss-2016b-LAPACK-3.7.0
0.2.20 GCC-6.4.0-2.28 (Current Default Version)
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OpenCL

Version Toolchain / Variant
2.2 GCC-4.9.3-2.25
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OpenCV

Version Toolchain / Variant
3.1.0 GCC-4.9.3-2.25
3.1.0 intel-2016a (Current Default Version)
Back to the list

OpenFOAM

Version Toolchain / Variant
4.0 intel-2016a
Back to the list

OpenMPI

Version Toolchain / Variant
1.4.5 GCC-4.6.3-no-OFED
1.6.4 GCC-4.7.2
1.6.5 GCC-4.8.1
1.6.5 GCC-4.8.2
1.8.8 GNU-4.9.3-2.25
1.8.8 iccifort-2015.3.187-GNU-4.9.3-2.25
1.10.2 GCC-4.9.3-2.25
1.10.3 GCC-5.4.0-2.26
1.10.3 iccifort-2016.3.210-GCC-5.4.0-2.26
2.1.1 GCC-6.4.0-2.28 (Current Default Version)
2.1.2 iccifort-2018.1.163-GCC-6.4.0-2.28
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OpenPGM

Version Toolchain / Variant
5.2.122 goolf-1.4.10
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PCRE

Version Toolchain / Variant
8.37 intel-2016a
8.38 GCC-4.9.3-2.25
8.38 intel-2016a
8.39 foss-2016b
8.39 intel-2016a (Current Default Version)
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PEITHO

Version Toolchain / Variant
0.1.3 intel-2016a-Python-2.7.11
Back to the list

PETSc

Version Toolchain / Variant
3.7.5 foss-2016b-downloaded-deps
3.7.5 intel-2016a-shared-Python-2.7.11
3.9.1 intel-2016a-downloaded-deps (Current Default Version)
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PETSc-lite

Version Toolchain / Variant
3.7.5 foss-2016b-Python-2.7.12
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PFLOTRAN

Version Toolchain / Variant
current intel-2016a
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PIL

Version Toolchain / Variant
1.1.7 intel-2016a-Python-2.7.11
1.1.7 intel-2016a-Python-2.7.12 (Current Default Version)
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PLINK

Version Toolchain / Variant
1.9b_4.1 x86_64
Back to the list

PROJ

Version Toolchain / Variant
4.9.2 foss-2016b
4.9.2 intel-2016a (Current Default Version)
Back to the list

Pango

Version Toolchain / Variant
1.40.1 GCC-4.9.3-2.25
1.40.1 intel-2016a (Current Default Version)
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Panoply

Version Toolchain / Variant
4.8.10 Java-1.8.0_91
Back to the list

ParMETIS

Version Toolchain / Variant
4.0.3 foss-2016b
4.0.3 intel-2015b
4.0.3 intel-2016a-shared (Current Default Version)
Back to the list

ParaView

Version Toolchain / Variant
5.1.2 intel-2016a-mpi
5.4.1 foss-2016b-mpi (Current Default Version)
Back to the list

Perl

Version Toolchain / Variant
5.16.3 goolf-1.4.10
5.20.3 foss-2016a
5.20.3 intel-2016a
5.22.1 foss-2016a-bare
5.24.0 foss-2016b (Current Default Version)
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Prodigal

Version Toolchain / Variant
2.6.3 GCC-4.9.3-2.25
Back to the list

PuLP

Version Toolchain / Variant
1.6.1 intel-2016a-Python-2.7.10
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PyCUDA

Version Toolchain / Variant
2016.1.2 intel-2016a-Python-2.7.11
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PyYAML

Version Toolchain / Variant
3.12 intel-2016a-Python-2.7.12
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Python

Version Toolchain / Variant
2.7.3 goolf-1.4.10
2.7.9 intel-2016a
2.7.10 GCC-4.9.3-2.25-bare
2.7.10 GCC-4.9.3-2.25
2.7.10 intel-2015b
2.7.10 intel-2016a
2.7.11 foss-2016a
2.7.11 intel-2016a
2.7.12 foss-2016b
2.7.12 intel-2016a
3.5.1 intel-2016a
3.6.3 intel-2016a (Current Default Version)
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QIIME

Version Toolchain / Variant
1.9.1 intel-2016a-Python-2.7.10-numpy-1.10.4
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Qt

Version Toolchain / Variant
4.8.7 intel-2016a
Back to the list

Qt5

Version Toolchain / Variant
5.7.0 foss-2016b
5.7.0 intel-2016a (Current Default Version)
Back to the list

QuantumESPRESSO

Version Toolchain / Variant
5.0.2 goolf-1.4.10
5.2.1 intel-2016a
5.4.0 intel-2016a (Current Default Version)
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Qwt

Version Toolchain / Variant
5.2.0 intel-2016a
Back to the list

R

Version Toolchain / Variant
3.3.2 intel-2016a
3.4.0 intel-2016a (Current Default Version)
3.4.1 foss-2016b-X11-20160819
Back to the list

RAxML

Version Toolchain / Variant
8.1.1 goolf-1.4.10-mpi-avx
8.2.4 intel-2015b-hybrid-avx2 (Current Default Version)
Back to the list

RDP-Classifier

Version Toolchain / Variant
2.7 Java-1.7.0_60
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RIP

Version Toolchain / Variant
4.5 goolf-1.4.10
Back to the list

RSEM

Version Toolchain / Variant
1.3.0 intel-2016a
Back to the list

RSEQtools

Version Toolchain / Variant
0.6 goolf-1.4.10
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Ray

Version Toolchain / Variant
2.3.1 intel-2016a
Back to the list

Rosetta

Version Toolchain / Variant
2016.46.59086 foss-2016b
Back to the list

SAMtools

Version Toolchain / Variant
0.1.20 intel-2016a
1.2 goolf-1.4.10 (Current Default Version)
1.3 intel-2016a
Back to the list

SCOTCH

Version Toolchain / Variant
6.0.4 foss-2016b
6.0.4 intel-2016a (Current Default Version)
Back to the list

SCons

Version Toolchain / Variant
2.5.0 foss-2016b-Python-2.7.12
Back to the list

SMALT

Version Toolchain / Variant
0.7.5 goolf-1.4.10
Back to the list

SOAPdenovo

Version Toolchain / Variant
1.05 goolf-1.4.10
Back to the list

SPAdes

Version Toolchain / Variant
3.9.0 foss-2016a
Back to the list

SPECFEM2D

Version Toolchain / Variant
stable intel-2016a
Back to the list

SQLite

Version Toolchain / Variant
3.8.8.1 intel-2016a
3.8.10 GCC-4.9.3-2.25
3.8.10.2 GCC-4.9.3-2.25
3.8.10.2 intel-2015b
3.8.10.2 intel-2016a
3.9.2 foss-2016a
3.9.2 intel-2016a
3.13.0 foss-2016b
3.13.0 intel-2016a
3.20.1 intel-2016a (Current Default Version)
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STAR

Version Toolchain / Variant
2.5.1b intel-2016a
Back to the list

SWIG

Version Toolchain / Variant
3.0.8 intel-2016a-Python-2.7.11
3.0.10 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

SageMath

Version Toolchain / Variant
8.1 gompi-2017b
Back to the list

ScaLAPACK

Version Toolchain / Variant
2.0.2 gompi-1.4.10-OpenBLAS-0.2.6-LAPACK-3.4.2
2.0.2 gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0
2.0.2 gompi-2016b-OpenBLAS-0.2.18-LAPACK-3.6.1
2.0.2 gompi-2017b-OpenBLAS-0.2.20 (Current Default Version)
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Schrodinger

Version Toolchain / Variant
2017 1
Back to the list

ScienceTools

Version Toolchain / Variant
v10r0p5  
Back to the list

ScientificPython

Version Toolchain / Variant
2.9.4 foss-2016b-Python-2.7.12
2.9.4 intel-2016a-Python-2.7.11 (Current Default Version)
Back to the list

SeismicUnix

Version Toolchain / Variant
44R5 intel-2016a
Back to the list

Spark

Version Toolchain / Variant
2.0.0  
2.2.0 Hadoop-2.6-Java-1.7.0_80
2.2.0 Hadoop-2.6-Java-1.8.0_152 (Current Default Version)
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Stacks

Version Toolchain / Variant
1.41 intel-2016a
Back to the list

Stampy

Version Toolchain / Variant
1.0.29 intel-2016a-Python-2.7.10
Back to the list

SuiteSparse

Version Toolchain / Variant
4.4.6 intel-2015b-ParMETIS-4.0.3
4.5.3 foss-2016b-ParMETIS-4.0.3 (Current Default Version)
Back to the list

SuperLU

Version Toolchain / Variant
5.2.1 intel-2016a-shared
Back to the list

Szip

Version Toolchain / Variant
2.1 foss-2016b
2.1 GCC-4.9.3-2.25
2.1 GCCcore-5.4.0
2.1 goolf-1.4.10
2.1 intel-2015b
2.1 intel-2016a
2.1 iompi-2015.03
2.1.1 foss-2017b
2.1.1 GCCcore-6.4.0
2.1.1 iomkl-2018a (Current Default Version)
Back to the list

Tcl

Version Toolchain / Variant
8.5.12 intel-2016a
8.6.3 intel-2016a
8.6.4 foss-2016a
8.6.4 GCC-4.9.3-2.25
8.6.4 intel-2015b
8.6.4 intel-2016a
8.6.5 foss-2016b
8.6.5 intel-2016a
8.6.7 intel-2016a (Current Default Version)
Back to the list

TensorFlow

Version Toolchain / Variant
0.11.0 rc2-intel-2016a-Python-2.7.11
1.0.0 intel-2016a-Python-2.7.11 (Current Default Version)
1.0.1 intel-2016a-GPU-Python-2.7.12
1.1.0 intel-2016a-Python-2.7.12
Back to the list

Theano

Version Toolchain / Variant
0.6.0 goolf-1.4.10-Python-2.7.3
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Tk

Version Toolchain / Variant
8.6.3 intel-2016a-no-X11
8.6.4 foss-2016a-no-X11
8.6.4 GCC-4.9.3-2.25-no-X11
8.6.4 GCC-4.9.3-2.25
8.6.4 intel-2015b-no-X11
8.6.4 intel-2016a-no-X11
8.6.5 foss-2016b
8.6.5 intel-2016a (Current Default Version)
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TopHat

Version Toolchain / Variant
2.1.0 intel-2016a
Back to the list

Triangle

Version Toolchain / Variant
1.6 gcc-4.8.5
Back to the list

Trim_Galore

Version Toolchain / Variant
0.3.7 intel-2016a
0.4.1 intel-2016a (Current Default Version)
Back to the list

Trimmomatic

Version Toolchain / Variant
0.32 Java-1.7.0_80
0.35 Java-1.7.0_80 (Current Default Version)
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Trinity

Version Toolchain / Variant
2.2.0 foss-2016a
Back to the list

UDUNITS

Version Toolchain / Variant
2.1.24 goolf-1.4.10
2.2.19 intel-2015b
2.2.19 intel-2016a
2.2.26 intel-2018a (Current Default Version)
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VCFtools

Version Toolchain / Variant
0.1.14 intel-2016a
Back to the list

VTK

Version Toolchain / Variant
7.0.0 intel-2016a-Python-2.7.10
8.0.1 intel-2016a-Python-2.7.12 (Current Default Version)
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Velvet

Version Toolchain / Variant
1.2.07 goolf-1.4.10
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Vim

Version Toolchain / Variant
8.0 foss-2016a-Python-2.7.11
Back to the list

WPS

Version Toolchain / Variant
3.7 intel-2016a-dmpar
3.8 intel-2016a-dmpar (Current Default Version)
Back to the list

WRF

Version Toolchain / Variant
3.6.1 intel-2016a-dmpar
3.7 intel-2016a-dmpar
3.7 iompi-2015.03-dmpar
3.7.1 intel-2016a-dmpar-chem
3.7.1 intel-2016a-dmpar (Current Default Version)
3.8.0 intel-2016a-dmpar
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X11

Version Toolchain / Variant
20160819 foss-2016b
20160819 intel-2016a (Current Default Version)
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XZ

Version Toolchain / Variant
5.2.2 foss-2016b
5.2.2 GCCcore-4.9.3
5.2.2 intel-2016a
5.2.3 GCCcore-6.4.0
5.2.3 intel-2016a (Current Default Version)
Back to the list

YAXT

Version Toolchain / Variant
0.4.4 intel-2016a
Back to the list

Yasm

Version Toolchain / Variant
1.3.0 GCC-4.9.3-2.25
1.3.0 intel-2016a (Current Default Version)
Back to the list

ZeroMQ

Version Toolchain / Variant
3.2.2 goolf-1.4.10
Back to the list

ant

Version Toolchain / Variant
1.9.6 Java-1.8.0_91
1.9.7 Java-1.8.0_92 (Current Default Version)
Back to the list

basemap

Version Toolchain / Variant
1.0.7 intel-2016a-Python-2.7.11
1.0.7 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

binutils

Version Toolchain / Variant
2.25 GCC-4.9.3-binutils-2.25
2.25 GCCcore-4.9.3
2.25  
2.26 GCCcore-5.4.0
2.26  
2.28 foss-2016b
2.28 foss-2017b
2.28 GCCcore-6.4.0
2.28  
2.29 GCCcore-7.2.0
2.29 (Current Default Version)
Back to the list

biodeps

Version Toolchain / Variant
1.6 goolf-1.4.10
Back to the list

btrim64

Version Toolchain / Variant
0.3.0  
Back to the list

bzip2

Version Toolchain / Variant
1.0.6 foss-2016a
1.0.6 foss-2016b
1.0.6 GCC-4.9.3-2.25
1.0.6 goolf-1.4.10
1.0.6 intel-2015b
1.0.6 intel-2016a (Current Default Version)
Back to the list

cURL

Version Toolchain / Variant
7.43.0 intel-2015b
7.43.0 intel-2016a
7.45.0 intel-2015b
7.47.0 foss-2016a
7.47.0 intel-2016a
7.47.0 iompi-2015.03
7.49.1 foss-2016b
7.49.1 intel-2016a (Current Default Version)
7.56.0 GCCcore-6.4.0
7.58.0 iomkl-2018a
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cafe

Version Toolchain / Variant
3.1 intel-2016a
Back to the list

cairo

Version Toolchain / Variant
1.14.2 intel-2016a
1.14.6 foss-2016b
1.14.6 GCC-4.9.3-2.25-GLib-2.48.0
1.14.6 intel-2016a-GLib-2.48.0 (Current Default Version)
Back to the list

cuDNN

Version Toolchain / Variant
5.0 CUDA-7.5.18
5.0 CUDA-8.0
5.1 CUDA-8.0
5.1 intel-2016a-CUDA-8.0.44 (Current Default Version)
Back to the list

cutadapt

Version Toolchain / Variant
1.5 intel-2016a-Python-2.7.10
1.11 intel-2016a-Python-2.7.10 (Current Default Version)
Back to the list

damageproto

Version Toolchain / Variant
1.2.1 GCC-4.9.3-2.25
Back to the list

dri2proto

Version Toolchain / Variant
2.8 GCC-4.9.3-2.25
Back to the list

dri3proto

Version Toolchain / Variant
1.0 GCC-4.9.3-2.25
Back to the list

eccodes

Version Toolchain / Variant
2.1.0 foss-2016a
Back to the list

eudev

Version Toolchain / Variant
3.1.5 GCC-4.9.3-2.25
3.1.5 intel-2016a (Current Default Version)
Back to the list

expat

Version Toolchain / Variant
2.1.0 foss-2016a
2.1.0 goolf-1.4.10
2.1.0 intel-2015b
2.1.0 intel-2016a
2.1.1 GCC-4.9.3-2.25
2.1.1 intel-2016a
2.2.0 foss-2016b
2.2.0 intel-2016a
2.2.5 GCCcore-6.4.0 (Current Default Version)
Back to the list

fixesproto

Version Toolchain / Variant
5.0 GCC-4.9.3-2.25
5.0 intel-2016a (Current Default Version)
Back to the list

flex

Version Toolchain / Variant
2.5.37 goolf-1.4.10
2.5.39 GCC-4.9.3-binutils-2.25
2.5.39 GCCcore-4.9.3
2.5.39 intel-2015b
2.5.39 intel-2016a
2.5.39  
2.6.0 foss-2016b
2.6.0 GCC-4.9.3-2.25
2.6.0 GCCcore-5.4.0
2.6.0 intel-2016a
2.6.0 iompi-2015.03
2.6.0  
2.6.3  
2.6.4 foss-2016b
2.6.4 foss-2017b
2.6.4 GCCcore-6.4.0
2.6.4 GCCcore-7.2.0
2.6.4 (Current Default Version)
Back to the list

flowPsi

Version Toolchain / Variant
rel 1-0-beta-3-intel-2016a
rel 1-beta-6-intel-2016a (Current Default Version)
Back to the list

fontconfig

Version Toolchain / Variant
2.11.94 intel-2016a
2.11.95 GCC-4.9.3-2.25
2.11.95 intel-2016a
2.12.1 foss-2016b
2.12.1 intel-2016a (Current Default Version)
Back to the list

fontsproto

Version Toolchain / Variant
2.1.3 GCC-4.9.3-2.25
2.1.3 intel-2016a (Current Default Version)
Back to the list

foss

Version Toolchain / Variant
2016a  
2016b  
2017b (Current Default Version)
Back to the list

freeglut

Version Toolchain / Variant
3.0.0 GCC-4.9.3-2.25
Back to the list

freetype

Version Toolchain / Variant
2.4.10 goolf-1.4.10
2.6 intel-2016a
2.6.1 intel-2016a
2.6.2 GCC-4.9.3-2.25
2.6.2 intel-2016a
2.6.3 GCC-4.9.3-2.25
2.6.3 intel-2016a
2.6.5 foss-2016b
2.6.5 intel-2016a
2.7 intel-2016a (Current Default Version)
Back to the list

gcccuda

Version Toolchain / Variant
2.6.10  
Back to the list

gettext

Version Toolchain / Variant
0.19.2 intel-2016a
0.19.6 foss-2016b
0.19.7 foss-2016a
0.19.7 GCC-4.9.3-2.25
0.19.7 intel-2016a
0.19.8 foss-2016b
0.19.8 intel-2016a
0.19.8  
0.19.8.1 (Current Default Version)
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gflags

Version Toolchain / Variant
2.1.2 GCC-4.9.3-2.25
Back to the list

git

Version Toolchain / Variant
2.8.0 foss-2016a
Back to the list

glog

Version Toolchain / Variant
0.3.4 GCC-4.9.3-2.25
Back to the list

glproto

Version Toolchain / Variant
1.4.17 GCC-4.9.3-2.25
1.4.17 intel-2016a (Current Default Version)
Back to the list

gompi

Version Toolchain / Variant
1.1.0 no-OFED
1.4.10  
1.5.12  
1.5.14  
2016a  
2016b  
2017b (Current Default Version)
Back to the list

goolf

Version Toolchain / Variant
1.4.10  
Back to the list

gperf

Version Toolchain / Variant
3.0.4 GCC-4.9.3-2.25
3.0.4 intel-2016a (Current Default Version)
Back to the list

grib_api

Version Toolchain / Variant
1.17.0 intel-2016a
Back to the list

gzip

Version Toolchain / Variant
1.5 goolf-1.4.10
1.6 foss-2016b
1.6 intel-2016a (Current Default Version)
Back to the list

h5py

Version Toolchain / Variant
2.5.0 intel-2016a-Python-2.7.10-HDF5-1.8.16
2.6.0 intel-2016a-Python-2.7.12
2.7.0 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

help2man

Version Toolchain / Variant
1.47.4 foss-2017b
1.47.4 GCCcore-5.4.0
1.47.4 GCCcore-6.4.0
1.47.4 GCCcore-7.2.0
1.47.4 (Current Default Version)
Back to the list

hwloc

Version Toolchain / Variant
1.6.2 GCC-4.7.2
1.8.1 GCC-4.8.2
1.11.0 GNU-4.9.3-2.25
1.11.1 iccifort-2015.3.187-GNU-4.9.3-2.25
1.11.2 GCC-4.9.3-2.25
1.11.3 GCC-5.4.0-2.26
1.11.3 iccifort-2016.3.210-GCC-5.4.0-2.26
1.11.5 intel-2016a
1.11.7 GCCcore-6.4.0
1.11.8 iccifort-2018.1.163-GCC-6.4.0-2.28 (Current Default Version)
Back to the list

icc

Version Toolchain / Variant
2015.3.187 GNU-4.9.3-2.25
2015.3.187  
2016.1.150 GCC-4.9.3-2.25
2016.3.210 GCC-5.4.0-2.26 (Current Default Version)
2018.1.163 GCC-6.4.0-2.28
Back to the list

iccifort

Version Toolchain / Variant
2015.3.187 GNU-4.9.3-2.25
2015.3.187  
2016.1.150 GCC-4.9.3-2.25
2016.3.210 GCC-5.4.0-2.26 (Current Default Version)
2018.1.163 GCC-6.4.0-2.28
Back to the list

ictce

Version Toolchain / Variant
7.3.5  
Back to the list

ifort

Version Toolchain / Variant
2015.3.187 GNU-4.9.3-2.25
2016.1.150 GCC-4.9.3-2.25
2016.3.210 GCC-5.4.0-2.26 (Current Default Version)
2018.1.163 GCC-6.4.0-2.28
Back to the list

iimpi

Version Toolchain / Variant
7.3.5 GNU-4.9.3-2.25
7.3.5  
8.1.5 GCC-4.9.3-2.25 (Current Default Version)
2018a  
Back to the list

imkl

Version Toolchain / Variant
11.2.3.187 iimpi-7.3.5-GNU-4.9.3-2.25
11.2.3.187 iimpi-7.3.5
11.2.3.187 iompi-2015.03
11.3.1.150 iimpi-8.1.5-GCC-4.9.3-2.25 (Current Default Version)
2018.1.163 iimpi-2018a
2018.1.163 iompi-2018a
Back to the list

impi

Version Toolchain / Variant
5.0.3.048 iccifort-2015.3.187-GNU-4.9.3-2.25
5.0.3.048 iccifort-2015.3.187
5.1.2.150 iccifort-2016.1.150-GCC-4.9.3-2.25 (Current Default Version)
2018.1.163 iccifort-2018.1.163-GCC-6.4.0-2.28
Back to the list

inputproto

Version Toolchain / Variant
2.3.1 foss-2016b
2.3.1 GCC-4.9.3-2.25
2.3.1 intel-2016a (Current Default Version)
Back to the list

intel

Version Toolchain / Variant
2015b  
2016a (Current Default Version)
2018a  
Back to the list

iomkl

Version Toolchain / Variant
2018a  
Back to the list

iompi

Version Toolchain / Variant
2015.03  
2016.07 (Current Default Version)
2018a  
Back to the list

kbproto

Version Toolchain / Variant
1.0.7 foss-2016b
1.0.7 GCC-4.9.3-2.25
1.0.7 intel-2016a (Current Default Version)
Back to the list

libGLU

Version Toolchain / Variant
9.0.0 foss-2016b
9.0.0 intel-2016a-Mesa-11.2.1
9.0.0 intel-2016a (Current Default Version)
Back to the list

libICE

Version Toolchain / Variant
1.0.9 foss-2016b
1.0.9 intel-2016a (Current Default Version)
Back to the list

libSM

Version Toolchain / Variant
1.2.2 foss-2016b
1.2.2 intel-2016a (Current Default Version)
Back to the list

libX11

Version Toolchain / Variant
1.6.3 foss-2016b
1.6.3 GCC-4.9.3-2.25
1.6.3 intel-2016a (Current Default Version)
Back to the list

libXau

Version Toolchain / Variant
1.0.8 foss-2016b
1.0.8 GCC-4.9.3-2.25
1.0.8 intel-2016a (Current Default Version)
Back to the list

libXaw

Version Toolchain / Variant
1.0.12 foss-2016b
Back to the list

libXcursor

Version Toolchain / Variant
1.1.14 intel-2016a
Back to the list

libXdamage

Version Toolchain / Variant
1.1.4 GCC-4.9.3-2.25
1.1.4 intel-2016a (Current Default Version)
Back to the list

libXdmcp

Version Toolchain / Variant
1.1.2 foss-2016b
1.1.2 GCC-4.9.3-2.25
1.1.2 intel-2016a (Current Default Version)
Back to the list

libXext

Version Toolchain / Variant
1.3.3 GCC-4.9.3-2.25
1.3.3 intel-2016a (Current Default Version)
Back to the list

libXfixes

Version Toolchain / Variant
5.0.1 GCC-4.9.3-2.25
5.0.1 intel-2016a (Current Default Version)
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libXfont

Version Toolchain / Variant
1.5.1 GCC-4.9.3-2.25
1.5.1 intel-2016a-freetype-2.6.3 (Current Default Version)
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libXft

Version Toolchain / Variant
2.3.2 intel-2016a
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libXi

Version Toolchain / Variant
1.7.6 GCC-4.9.3-2.25
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libXinerama

Version Toolchain / Variant
1.1.3 intel-2016a
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libXmu

Version Toolchain / Variant
1.1.2 foss-2016b
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libXpm

Version Toolchain / Variant
3.5.11 foss-2016b
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libXrandr

Version Toolchain / Variant
1.5.0 GCC-4.9.3-2.25
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libXrender

Version Toolchain / Variant
0.9.9 GCC-4.9.3-2.25
0.9.9 intel-2016a (Current Default Version)
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libXt

Version Toolchain / Variant
1.1.5 foss-2016b
1.1.5 intel-2016a (Current Default Version)
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libdap

Version Toolchain / Variant
3.14.0 intel-2015b-Python-2.7.10
3.19.1 intel-2018a (Current Default Version)
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libdrm

Version Toolchain / Variant
2.4.67 GCC-4.9.3-2.25
2.4.68 intel-2016a
2.4.70 foss-2016b
2.4.70 intel-2016a (Current Default Version)
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libffi

Version Toolchain / Variant
3.1 intel-2016a (Current Default Version)
3.2.1 foss-2016b
3.2.1 GCC-4.9.3-2.25
3.2.1 intel-2016a
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libfontenc

Version Toolchain / Variant
1.1.3 GCC-4.9.3-2.25
1.1.3 intel-2016a (Current Default Version)
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libgd

Version Toolchain / Variant
2.2.3 foss-2016b
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libgtextutils

Version Toolchain / Variant
0.6.1 goolf-1.4.10
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libjpeg-turbo

Version Toolchain / Variant
1.3.1 intel-2016a
1.4.2 GCC-4.9.3-2.25-NASM-2.12.01
1.4.2 intel-2016a-NASM-2.12.01
1.4.2 intel-2016a
1.5.0 foss-2016b
1.5.0 intel-2016a (Current Default Version)
1.5.3 GCCcore-6.4.0
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libpciaccess

Version Toolchain / Variant
0.13.4 GCC-4.9.3-2.25
0.13.4 intel-2016a (Current Default Version)
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libpng

Version Toolchain / Variant
1.5.13 goolf-1.4.10
1.6.2 goolf-1.4.10
1.6.6 goolf-1.4.10
1.6.17 intel-2016a
1.6.18 intel-2016a
1.6.21 GCC-4.9.3-2.25
1.6.21 intel-2016a
1.6.23 intel-2016a
1.6.24 foss-2016b
1.6.24 intel-2016a
1.6.26 foss-2016b
1.6.26 intel-2016a (Current Default Version)
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libpthread-stubs

Version Toolchain / Variant
0.3 foss-2016b
0.3 GCC-4.9.3-2.25
0.3 intel-2016a (Current Default Version)
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libreadline

Version Toolchain / Variant
6.2 goolf-1.4.10
6.3 foss-2016a
6.3 foss-2016b
6.3 GCC-4.9.3-2.25
6.3 GCCcore-4.9.3
6.3 intel-2015b
6.3 intel-2016a
7.0 intel-2016a (Current Default Version)
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libsbml

Version Toolchain / Variant
5.15.0 intel-2016a-Python-2.7.11
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libtool

Version Toolchain / Variant
2.4.2 goolf-1.4.10
2.4.6 foss-2016a
2.4.6 foss-2016b
2.4.6 GCC-4.9.2
2.4.6 GCC-4.9.3-2.25
2.4.6 GCCcore-4.9.3
2.4.6 GCCcore-6.4.0
2.4.6 GNU-4.9.3-2.25
2.4.6 intel-2016a (Current Default Version)
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libxcb

Version Toolchain / Variant
1.11.1 foss-2016b
1.11.1 GCC-4.9.3-2.25
1.11.1 intel-2016a (Current Default Version)
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libxml2

Version Toolchain / Variant
2.9.2 intel-2016a
2.9.3 foss-2016a
2.9.3 GCC-4.9.3-2.25
2.9.3 intel-2015b-Python-2.7.10
2.9.3 intel-2016a
2.9.4 foss-2016b-Python-2.7.12
2.9.4 foss-2016b
2.9.4 GCCcore-4.9.3
2.9.4 GCCcore-6.4.0
2.9.4 intel-2016a-Python-2.7.12
2.9.4 intel-2016a (Current Default Version)
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libyaml

Version Toolchain / Variant
0.1.7  
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makedepend

Version Toolchain / Variant
1.0.5 GCC-4.9.3-2.25
1.0.5 intel-2016a (Current Default Version)
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matplotlib

Version Toolchain / Variant
1.1.1 goolf-1.4.10-Python-2.7.3
1.5.0 intel-2016a-Python-2.7.10
1.5.0 intel-2016a-Python-2.7.11
1.5.1 intel-2016a-Python-2.7.11
1.5.1 intel-2016a-Python-2.7.12
1.5.1 intel-2016a-Python-3.6.3
1.5.3 intel-2016a-Python-3.5.1 (Current Default Version)
Back to the list

mpi4py

Version Toolchain / Variant
1.3.1 intel-2015b-Python-2.7.10-timed-pingpong
1.3.1 intel-2015b-Python-2.7.10 (Current Default Version)
1.3.1 intel-2016a-Python-2.7.10
3.0.0 intel-2016a-Python-3.6.3
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mpiBLAST

Version Toolchain / Variant
1.6.0 goolf-1.4.10
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mpmath

Version Toolchain / Variant
0.19 foss-2016b-Python-2.7.12
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myHadoop

Version Toolchain / Variant
1.26.18  
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ncurses

Version Toolchain / Variant
5.9 GCC-4.9.3-2.25
5.9 GNU-4.9.3-2.25
5.9 goolf-1.4.10
5.9 intel-2015b
5.9 intel-2016a
5.9 iompi-2015.03
6.0 foss-2016a
6.0 foss-2016b
6.0 GCC-4.9.3-2.25
6.0 GCCcore-4.9.3
6.0 GCCcore-6.4.0
6.0 intel-2016a
6.0 iompi-2015.03
6.0 (Current Default Version)
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ncview

Version Toolchain / Variant
2.1.2 goolf-1.4.10
Back to the list

netCDF

Version Toolchain / Variant
4.2.1.1 goolf-1.4.10
4.3.2 intel-2015b
4.3.2 intel-2016a
4.3.3.1 intel-2015b
4.3.3.1 intel-2016a
4.4.0 intel-2016a
4.4.0 iompi-2015.03
4.4.1 foss-2016b
4.4.1 intel-2016a
4.4.1 iompi-2015.03 (Current Default Version)
4.4.1.1 intel-2018a-HDF5-1.8.19
4.5.0 iomkl-2018a
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netCDF-Fortran

Version Toolchain / Variant
4.2 goolf-1.4.10
4.4.2 intel-2015b
4.4.3 intel-2016a
4.4.4 intel-2016a
4.4.4 iomkl-2018a
4.4.4 iompi-2015.03 (Current Default Version)
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netcdf4-python

Version Toolchain / Variant
1.1.8 intel-2015b-Python-2.7.10
1.2.4 intel-2016a-Python-3.5.1 (Current Default Version)
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nettle

Version Toolchain / Variant
3.2 foss-2016b
3.2 intel-2016a (Current Default Version)
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numactl

Version Toolchain / Variant
2.0.10 GNU-4.9.3-2.25
2.0.10 iccifort-2015.3.187-GNU-4.9.3-2.25
2.0.11 GCC-4.9.3-2.25
2.0.11 GCC-5.4.0-2.26
2.0.11 GCCcore-6.4.0
2.0.11 iccifort-2016.3.210-GCC-5.4.0-2.26
2.0.11 iccifort-2018.1.163-GCC-6.4.0-2.28
2.0.11 intel-2016a (Current Default Version)
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numpy

Version Toolchain / Variant
1.6.2 goolf-1.4.10-Python-2.7.3
1.7.1 goolf-1.4.10-Python-2.7.3
1.8.2 intel-2016a-Python-2.7.11
1.10.4 intel-2015b-Python-2.7.10
1.10.4 intel-2016a-Python-2.7.10
1.10.4 intel-2016a-Python-2.7.11
1.10.4 intel-2016a-Python-3.5.1
1.11.0 intel-2016a-Python-2.7.12
1.11.2 foss-2016b-Python-2.7.12
1.11.2 intel-2016a-Python-3.5.1
1.13.1 intel-2016a-Python-2.7.11
1.13.1 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

p3dfft

Version Toolchain / Variant
2.7.5 intel-2016a
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packmol

Version Toolchain / Variant
16.161 intel-2016a
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pandas

Version Toolchain / Variant
0.11.0 goolf-1.4.10-Python-2.7.3
0.18.1 intel-2016a-Python-2.7.12 (Current Default Version)
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parallel-netcdf

Version Toolchain / Variant
1.8.1 intel-2016a
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picard

Version Toolchain / Variant
2.5.0 Java-1.8.0_91
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pip

Version Toolchain / Variant
8.1.2 GCC-4.9.3-2.25-Python-2.7.10
8.1.2 intel-2016a-Python-2.7.10
8.1.2 intel-2016a-Python-2.7.11
9.0.1 intel-2016a-Python-2.7.10
9.0.1 intel-2016a-Python-2.7.11
9.0.1 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

pixman

Version Toolchain / Variant
0.32.6 intel-2016a
0.34.0 foss-2016b
0.34.0 GCC-4.9.3-2.25
0.34.0 intel-2016a (Current Default Version)
Back to the list

pkg-config

Version Toolchain / Variant
0.29 foss-2016b
0.29 GCC-4.9.3-2.25
0.29 intel-2016a
0.29.1 foss-2016b
0.29.1 intel-2016a
0.29.2 GCCcore-6.4.0
0.29.2 intel-2016a (Current Default Version)
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pkgconfig

Version Toolchain / Variant
1.1.0 intel-2016a-Python-2.7.10
1.2.2 intel-2016a-Python-2.7.12 (Current Default Version)
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popt

Version Toolchain / Variant
1.16 foss-2016b
Back to the list

prokka

Version Toolchain / Variant
1.11 foss-2016b-BioPerl-1.7.0
Back to the list

protobuf

Version Toolchain / Variant
2.5.0  
3.1.0 GCC-4.9.3-2.25
3.1.0 intel-2016a
3.1.0 Python-2.7.10
3.2.0 intel-2016a (Current Default Version)
Back to the list

protobuf-python

Version Toolchain / Variant
3.1.0 intel-2016a-Python-2.7.11
3.2.0 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

pygrib

Version Toolchain / Variant
2.0.2rel intel-2016a-Python-2.7.12
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rDock

Version Toolchain / Variant
2013.1 foss-2016b
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randrproto

Version Toolchain / Variant
1.5.0 GCC-4.9.3-2.25
Back to the list

regex

Version Toolchain / Variant
2016.08.27 intel-2016a-Python-2.7.10
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renderproto

Version Toolchain / Variant
0.11 GCC-4.9.3-2.25
0.11 intel-2016a (Current Default Version)
Back to the list

scikit-learn

Version Toolchain / Variant
0.17.1 intel-2016a-Python-2.7.10
0.17.1 intel-2016a-Python-2.7.12
0.19.1 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

scipy

Version Toolchain / Variant
0.13.0 goolf-1.4.10-Python-2.7.3
0.16.1 intel-2015b-Python-2.7.10
0.17.0 intel-2016a-Python-2.7.12 (Current Default Version)
Back to the list

snappy

Version Toolchain / Variant
1.1.3 GCC-4.9.3-2.25
Back to the list

spark-corenlp

Version Toolchain / Variant
0.3.1 s_2.11
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sympy

Version Toolchain / Variant
1.0 foss-2016b-Python-2.7.12
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tabix

Version Toolchain / Variant
0.2.6 intel-2016a
Back to the list

tcsh

Version Toolchain / Variant
6.19.00 intel-2016a
6.19.00 iompi-2015.03 (Current Default Version)
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util-linux

Version Toolchain / Variant
2.22.2 goolf-1.4.10
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vmd

Version Toolchain / Variant
1.9.2 intel-2016a
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wheel

Version Toolchain / Variant
0.30.0 intel-2016a-Python-2.7.12
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x264

Version Toolchain / Variant
20160430 GCC-4.9.3-2.25
20160430 intel-2016a (Current Default Version)
Back to the list

xcb-proto

Version Toolchain / Variant
1.11  
Back to the list

xextproto

Version Toolchain / Variant
7.3.0 foss-2016b
7.3.0 GCC-4.9.3-2.25
7.3.0 intel-2016a (Current Default Version)
Back to the list

xineramaproto

Version Toolchain / Variant
1.2.1 intel-2016a
Back to the list

xorg-macros

Version Toolchain / Variant
1.19.0 foss-2016b
1.19.0 GCC-4.9.3-2.25
1.19.0 intel-2016a (Current Default Version)
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xprop

Version Toolchain / Variant
1.2.2 intel-2016a
Back to the list

xproto

Version Toolchain / Variant
7.0.28 foss-2016b
7.0.28 GCC-4.9.3-2.25
7.0.28 intel-2016a (Current Default Version)
   
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xtrans

Version Toolchain / Variant
1.3.5 foss-2016b
1.3.5 GCC-4.9.3-2.25
1.3.5 intel-2016a (Current Default Version)
Back to the list

zlib

Version Toolchain / Variant
1.2.5 goolf-1.4.10
1.2.7 goolf-1.4.10
1.2.8 foss-2016a
1.2.8 foss-2016b
1.2.8 GCC-4.9.3-binutils-2.25
1.2.8 GCC-4.9.3-2.25
1.2.8 GCCcore-4.9.3
1.2.8 GCCcore-5.4.0
1.2.8 goolf-1.4.10
1.2.8 intel-2015b
1.2.8 intel-2016a
1.2.8 iompi-2015.03
1.2.8  
1.2.11 foss-2017b
1.2.11 GCCcore-5.4.0
1.2.11 GCCcore-6.4.0
1.2.11 GCCcore-7.2.0
1.2.11 intel-2016a
1.2.11 iomkl-2018a
1.2.11 (Current Default Version)
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