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Equipment Listing

OU Gallogly College of Engineering, Oklahoma COBRE in Cancer Imaging Research, The University of Oklahoma website wordmark

COBRE: MITDC and CIDRC Shared Equipment Listing

Each of the following capital equipment will be available to all researchers affiliated to the Oklahoma COBRE of Medical Imaging for Translational Cancer Research. Each equipment will be administered by the Medical Imaging Technology Development Core (MITDC) or the Clinical Imaging and Data Resource Core (CIDRC). To maximize their usage, investigators will be able to book any of the equipment by contacting us.

MicroCT system

The MicroCT system (Quantum FX, Perkin Elmer) was equipped with a micro focus x-ray tube (L10101, Hamamatsu Photonics, Japan) and a flat panel detector (PaxScan 1313, Varian Medical Systems, California, USA). The x-ray tube and the detector are placed opposite to each other on a rotating gantry around an animal bed at a distance of 265 mm. The system operates at three geometric magnifications (M) of 1.72, 2.54 and 5.10. The x-ray tube has a tungsten target, beryllium output window with a thickness of 150 µm.


MicroCT System Specifications:

  • Voltage: 30 - 90kV
  • Current: 20 - 200µA
  • Focal Spot: 5um - 30µm
  • Anode Type: Tungsten
  • Field of View (FOV): 5 - 73mm
  • CT Reconstruction Pixel Size: 10 – 148µm

MicroCT operation support/training will be provided by MITDC research team. Please contact Dr. Yuhua Liyhli1500@ou.edu for detailed information.

 

                                                                     Sample Video of MicroCT Scanning


Phase Sensitive Breast Tomosynthesis System (PBT)

Based on theoretical and bench top investigations and supported by NIH academic-industry partnership grant, a patient imaging Phase Sensitive Breast Tomosynthesis (PBT) was built. The PBT system consists of a microfocus polychromatic x-ray source and a direct conversion-based flat panel detector coated with a 1mm thick amorphous selenium layer allowing a high detective quantum efficiency at high energies. The PBT system scans a compressed breast over 15° with 9 angular projection views. The high-energy scan parameters are carefully selected to ensure similar or lower mean glandular dose levels to the clinical standard of care systems. Phase retrieval and data binning are applied to the phase contrast angular projection views and a filtered back-projection algorithm is used to reconstruct the final images.


 

Phase Sensitive Breast Tomosynthesis System (PBT) Specifications:

  • X-ray Source Target: Tungsten (W). 
  • Focal Spot Size: 25 µm.
  • Output power: 10-39 W. 
  • Tube Voltage: 40-130 kVp 
  • Pixel array:  3328 × 4096. 
  • Pixel Pitch: 70 µm
  • R1= 70 cm. R2= 84 cm. (M): 2.2
  • FOV: 130 × 105 mm
  • Voxel Size: 64µm×64 µm×1mm

PBT System operation support/training will be provided by MITDC research team. Please contact Dr. Yuhua Liyhli1500@ou.edu for detailed information.


Andor BC43 Benchtop Spinning Disk Inverted Confocal Microscope (Oxford Instruments)

Andor BC43 benchtop spinning disk inverted confocal microscope enables confocal, widefield, and transmitted light imaging capabilities with four fixed wavelengths of 405 nm, 488 nm, 561 nm, and 638 nm. Objectives include 10x and 20x air, and 40x oil. Image acquisition speeds are up to 10 times faster than conventional point scanner-based confocal systems. The camera resolution is 6.5 µm pixel with 2048x2000 pixels and a field-of-view of 18.4 mm (diagonal).


Andor BC43 Benchtop Confocal Microscope Specifications:

  • Benchtop multimodal imaging system
  • Instant confocal: Blur-free imaging
  • Widefield imaging
  • Differential phase contrast & brightfield
  • Guaranteed optical performance
  • Super resolution ready
  • In-field upgradable imaging modes

Andor BC43 Confocal Microscope System operation support/training will be provided by members of Dr. Stefan Wilhelm research team.  Please contact Dr. Stefan Wilhelm with: stefan.wilhelm@ou.edu for detailed information.


Dell Precision 7960 Deep Learning (DL) Workstation

These new high performance deep-learning (DL) workstations were deployed at OSCER (OU Supercomputing Center for Education & Research). A total of 4 workstations were deployed. Each workstation is based on Dell Precision 7960 rack mount server, which equips two RTX 6000 Ada GPU cards. The detailed specifications are as follows: Four Intel Xeon Silver 4410Y (30MB Cache, 12 cores, 24 threads, 2.0 GHz to 3.9 GHz Turbo, 150W) CPU; 256GB (16x16GB) DDR5, 4800MHz, RDIMM ECC Memory;  2TB, 7200 RPM, 3.5-inch, SATA, HDD, AG-Enterprise Class;  OU Supercomputing Center for Education & Research Two Intel Xeon 4th Generation processors (Socket E, LGA-4677); 1TB ECC DDR5 4800 MHz memory.


Dell Precision 7960 Deep Learning (DL) Workstation Other Specifications:

  • Dual Intel 10GbE ports with Intel® X550-AT2 (RJ45, 10GBase-T); Intel E810-XXVDA4 Quad Port 10/25GbE SFP28 Adapter, OCP NIC 3.0; 512GB, M.2, PCIe NVMe, Class 40 Solid State Drive;
  • Two RTX 6000 Ada GPU cards (48 GB DDR6 for each).

 

Dell Precision 7960 Deep Learning (DL) Workstation operation support/training will be provided by members of Dr. Yuchen Qiu research team. Please contact Dr. Yuchen Qiu with: qiuyuchen@ou.edu for detailed information.


Vevo F2 Ultrasound and Photoacoustic Imaging System (FUJIFILM VisualSonics)

The Vevo F2 LAZR-X combines ultra-high-frequency and low frequency ultrasound (US) imaging with photoacoustic (PA) capabilities in a convenient all-in-one platform. While US provides high resolution anatomical imaging, PA provides co-registered real-time oxygen saturation and molecular imaging. Thus, the Vevo F2 can serve the entire in vivo oncology imaging workflow from precisely inducing orthotopic cancer models, to detecting pre-palpable lesions, monitoring tumor development, and assessing response to therapy. Moreover, the real-time oxygen saturation and molecular imaging capability will allow obtaining functional change and quantify drug biodistribution from intra-tumoral to whole body, thus, providing a comprehensive view of the tumor response to anti-parasitic drugs.


 

Vevo F2 Ultrasound and Photoacoustic Imaging System Specifications:

  • Superior resolution (down to 30 µm)
  • Customizable touch-screen interface
  • Ergonomic design (compact and portable) 
  • Wider range of animal models to be used in translational research

 

 

Vevo F2 Ultrasound Imaging System operation support/training will be provided by members of Dr. Qinggong Tang research team.  Please contact Dr. Qinggong Tang with: qtang@ou.edu for detailed information.


NIRScout X Functional Near Infrared Spectroscopy (fNIRS) System (NIRX)

This is an fNIRS system compatible with transcranial magnetic stimulation (TMS). The NIRScout X System can support up to 64x LED-2 illuminators and 32x detectors, and it is capable of tandem (multi-system) and hyperscanning (multi-subject) measurements.

The system comes with a complete cap kit, which includes adult head caps of different sizes, shower cap, holders, tops, links, cable trees and accessories for 16 sources and 16 detectors, and grommets to fit low-profile TMS- and MRI-compatible fiber optic NIRScap probes.


fNIRS System Specifications:

  • The fNIRS system is configured with 4x Avalanche Photodiode (APD) detector cards which connect to 16x detector leads through TMS-compatible bundles of 4x detector fibers.
  • The system is also compatible with EEG, tDCS, eye-tracking, and other modalities.

 

The fNIRS system operation support/training will be provided by members of Dr. Han Yuan research team. Please contact Dr. Han Yuan with: hanyuan@ou.edu


RTS2-301-SMS Laser Confocal Raman Microscopy/Spectroscopy System (Zolix Instruments)

RTS2-301-SMS laser confocal Raman microscopy/spectroscopy system is a two-wavelength (532 nm, 785 nm) fiber-coupled laser confocal upright microscope and Raman spectroscopy system. Both brightfield and confocal microscopy imaging can be performed. A 320-mm spectrometer (with three gratings: 1800g/mm, 600g/mm, 150g/mm) and a VIS-NIR CCD camera (2000x256 pixels, 15um pixel, QE >90%) is integrated for Raman confocal microscopy/spectroscopy with spectral resolution of <2cm-1. Up to four electrically switchable laser optical paths are available for integrating additional microscopy/imaging modalities.

 

Please contact Dr. Binbin Weng with: binbinweng@ou.edu

 

 



 
  • RTS2-301-SMS laser confocal Raman microscopy/spectroscopy system is a two-wavelength (532 nm, 785 nm) fiber-coupled laser confocal upright microscope and Raman spectroscopy system. 

QTscan 2000 Model-A Multimodal Ultrasound Breast Tomography System (QTimaging)

QTscan 2000 model-A multimodal ultrasound breast tomography system is a non-invasive, FDA cleared multimodal ultrasound (US) tomography system for simultaneous transmission-US (speed-of-sound or SOS) and reflection-US high-resolution 3D breast imaging without the need of contrast agents or radiation. These two US imaging modalities provide highly complementary and synergistic information about breast tissue, which may enable healthcare providers to effectively assess breast health. Because SOS-imaging is quantitative and the QTscan utilizes true 3D data acquisition and reconstruction, breast tissue characterization and discrimination is possible. Moreover, the QTscan technology can image through dense breasts unlike conventional breast imaging modalities, such as mammography. The FDA has designated the QTscan as meeting an unmet medical need for screening women at high-risk of breast cancer (FDA Breakthrough Device Designation). The QTscan is currently being used in clinics for both primary and supplementary screening, but it cannot be yet marketed as a replacement for mammography.

 

Please contact Dr. Javier Jo with: javierjo@ou.edu


TMAGMPCR Tissue Micro Array Grand Master with PCR (ePredia) (Real-time PCR Machine)

Faxitron CCD X-ray Image System


 
Specifications:
  • X-ray tube potential:10-35kVP
  • Magnifications: 1x- 5x
  • CCD detector: 1024x1024 array, pixel size 0.024x0.024 mm, 12 bits
  • Images spital frequency: 10-39lp/mm
  • FOV: 101.4 x 50.8 mm

Faxitron CCD X-ray Image System operation support/training will be provided by MITDC research team. Please contact Dr. Yuhua Liyhli1500@ou.edu for detailed information.


Telesto® Series PS-OCT Systems

VEG220C1 - Swept Source OCT Imaging System, 1300 nm, 200 kHz 

Please contact Dr. Qinggong Tang with: qtang@ou.edu for detailed information.


Bruker Fourier Transform Infrared Spectroscopy System